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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs142244142 chr7:76319618 T/TA POMZP3 chr7:76239303-76256578:- 1.09 5.85 3.35E-7 Box Plot
ACC rs142352066 chr8:71918567 AG/A XKR9 chr8:71581600-71702606:+ 0.68 6.95 6.06E-9 Box Plot
ACC rs1423566 chr5:96273767 T/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs142358773 chr7:76293778 T/C POMZP3 chr7:76239303-76256578:- 0.99 5.94 2.38E-7 Box Plot
ACC rs142373019 chr6:86407758 T/G SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs142455425 chr8:71666489 G/C XKR9 chr8:71581600-71702606:+ 0.65 6.54 2.65E-8 Box Plot
ACC rs142484675 chr20:44389064 T/C WFDC3 chr20:44376583-44420571:- 0.93 6.55 2.57E-8 Box Plot
ACC rs142951464 chr7:97480138 G/A TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs143098121 chr7:97408588 A/G TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs143156130 chr2:61374343 TTTTCC/T C2orf74 chr2:61372203-61391964:+ 0.57 6.02 1.78E-7 Box Plot
ACC rs143222615 chr12:48775672 T/C COL2A1 chr12:48366748-48398269:- 1.26 5.13 4.4E-6 Box Plot
ACC rs143291995 chr3:133409044 C/CA NPHP3 chr3:132399453-132441286:- 0.39 5.07 5.47E-6 Box Plot
ACC rs143508823 chr8:71937379 T/TAGCTAGTAAATGGCAG XKR9 chr8:71581600-71702606:+ 0.64 5.98 2.11E-7 Box Plot
ACC rs1435713 chr3:6409559 C/T GRM7 chr3:6811688-7783220:+ 0.65 5.14 4.15E-6 Box Plot
ACC rs143590453 chr7:97408491 A/G TECPR1 chr7:97843936-97881563:- 0.84 5.38 1.83E-6 Box Plot